If you are on a Mac and you are talking about the two *.dylib messages where you can select bin or ignore...? Then yes. This is not Toolbox, this happens for any Python script (launched from Moneybot). The script could just say “1” and it will still happen. (Technically, it’s because Python is generating dynamic cache libraries (with random numbers) on runtime and Mac’s gatekeeper doesn’t like it). InfiniteKind/Moneydance (Sean) is aware of it and are trying to develop a fix. In the meantime, it’s harmless, you can click any option and the message goes away. Toolbox is signed, as evidenced that there is no red signing warning within the Moneydance main screen.
I wish! I’ve been talking to Sean about it for a while. It started with the prior Mac OS upgrade. He knows it needs addressing. I guess the more that raise this as an issue, the more weight a fix will have.